CDS

Accession Number TCMCG047C01295
gbkey CDS
Protein Id GFP79860.1
Location join(2928930..2929083,2929595..2929806,2931423..2931566,2931744..2931917,2932003..2932102,2932536..2932654,2932749..2932871,2932960..2933031,2933368..2933460,2933701..2933814,2933895..2934017,2934347..2934532,2934634..2934708,2934928..2935064,2935304..2935438,2936138..2936283,2936456..2936521,2936841..2936947,2937158..2937238,2937335..2937409,2937498..2937599,2938094..2938262,2938343..2938491,2938723..2938806,2938920..2939020,2939166..2939319,2939448..2939522,2939639..2939789,2940548..2941133,2941464..2941524,2941721..2941866,2941933..2942047,2942320..2942418,2942700..2943088,2943179..2943355,2943587..2943683,2943776..2943931,2944015..2944245,2944591..2944674,2944858..2944966,2945857..2945942)
Organism Phtheirospermum japonicum
locus_tag PHJA_000129400

Protein

Length 1918aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJDB3858 BioSample:SAMD00029051
db_source BMAC01000013.1
Definition protein rrp5 homolog [Phtheirospermum japonicum]
Locus_tag PHJA_000129400

EGGNOG-MAPPER Annotation

COG_category A
Description Suppressor of forked protein (Suf)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14792        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000460        [VIEW IN EMBL-EBI]
GO:0000462        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCACCGCCTTCAAAGAAACCTGAATCTAAACCCAATTTGAAAAACCTTGAGCGTCCGTCCAAGAAACGTCCTAAGTCTGAAGGAAACGGCGCCGTTTCGTCGGCGCAATTACCTCTTCAGGTTGAAGACGATGTCCCCGACTTCCCCCGAGGCGGGGGAGGTTCTTTTAGTAGAGAAGAGAGAAATGGGGCAAGGACAGTTGAAGACAGGGACTTTGAGTCAGACCAGATAGTGTTGAAGAAAAGGAAGAAGGAAAAGCGGGTGCAAAATAGGATTCAGTCAACAGAGGAGGATTTAGGTTCGCTCTTTGGAGATGGAATCACTGGAAAGCTTCCAAGATTTGCCAATAAGATCACTATGAAGAATATCTCTTTGGGAATGAAGCTATGGGGTGTGATTGCTGAAATGAACGAGAAAGATATTGTAGTTGGTCTTCCTGGGGGCTTAAGGGGACTAGTTCGTGCAAGTGATGCTTTTGATCCTATTTTGGGGGACGGAGTAAAAGTGGATGTGGAGAATGGCTTCCTTTCTAGAATATATCATGAAGGGCAGCTTGTGTCTTGTACCGTATTGCAAATAGATGATGATAAGAAAGAGATAGCAAAACGAAAGATCTGGCTTTCTCTACGACTGTCTTTATTGCACCAAAATTTATCATTGGATACTATTCAAGAAGGAATGGTGCTGAGTGCGTACGTGAAAAGCATTGAGGATCATGGTTTTATACTTCATTTTGGATTGTCCTCTTTTGCAGGATTTATGCCGAAAGACAACCAATCTGAGAGTAGAACCAATAAGGTGAGCATGGGGCAGCTTTCACAAGGGATTGTTAAAAGAGTCGACAGAACTCGGAAGGTTGTCCATTTGAGTTCCGATCCTGACATGATCTCAAAATGTGTGACCAAGGAGCTTAAGGGTATCTCAATTGATCTTCTCGTTCCAGGCATGATGGTTAATGCTCGAGTGCAGTCAACCCTCGAAAATGGCGTCATGTTTTCCTTTCTTACTTACTTTACTGGAACCGTTGATTTATTTAATCTAGATAAAACTTTTCCCTCTTCAAACTGGAAGAATGATTATACCAAAAATATGAAGTTCAATGCTCGGATCTTGTTCATTGATCCTTCAACAAGGGCTGTTGGTTTAACATTGAATCGTCACCTAGTCAGTAATAAGGCTGCATCATCTCTTGTTAAAATCGGCGACATCTTCGATCAATCTAAAGTGGTCAGGGTTGACAAGGGGTCAGGCCTTCTTCTGGAAATTCCTACTTTACCAACTTCAACCCCAACCTATGTCAATGCAACTGATGTTGCTGACAAGGATGTTGGGAAATTGGAAAAGAGTTTTAAGGAAGGAAGTCTTGTTCGTGTCAGGGTCCATGGTTACAGGCACTTGGAAGGGCTCGCAACTGGTATTTTAAAGACTAGTGCCTTGGAAGGTATGGTTTTCACTCACTCTGACGTAAAGCCAGGAATGGTGGTAAAAGCTAAAGTCATTGCAGTTGACAGTTTTGGTGCTATTGTGCAATTTGCTAGTGGTGTGAAAGCCCTATGTCCTCTCCGTCATATGTCAGAGTTTGAAATTGCAAAGCCTAGAAAAAAATTTCAGAATGGGGCTGAGTTGGTTTTTCGTGTTCTAGGTTGCAAATCCAAGAGAATCACTGTTACACACAAGAAAACTCTTGTGAAATCTAAGCTACAGATTCTTAGTTCTTACGCCGATGCAGCTGCTGGGTTAGTTACTCATGGGTGGATCACAAAGATTGAAAAGCATGGTTGCTTTGTTCGGTTCTACAATGGGGTTCAAGGACTTGCTCCCAGATCTGAACTTGGTTTGGGACCCGGTGGTGACATAGGTTCCATGTATCATGTTGAACAAGTTGTCAAGTGTAGAGTTGTAAATTGTATCCCTGCTTCACACAGAATAACCCTCAGTTTCAACATGACACCTTCAAGGGCATCAGCAGATGAGAGTGTGAAACCAGGCAGCCTGGTCTCTGGAGTTGTTGAACGTATAACACCTCATGCACTTATAGTGGACATCAATGCCTCCAGTCACATTAAAGGCACCATCTCTCTCGAACATTTGGCAGACCACCAAGGCCTTGCTGCTCTATTGATGTCTGCCATGAAGCCAGGATATCAGTTTGATGAATTATTGGTTCTTGATATTGAAGGAAACAATGTTGTACTCACTGCGAAGTATTCACTAGTTAACTCAGTCCAACAGCTCCCTGTTGATATTAGCCAAATCCGTACCCACTCTGTGATGCATGGCTACATATGTAATATAATTGAAACTGGCTGCTTTGTTCGTTTTATTGGACGTTCAACTGGTTTTGCTCCCAAAAGCAAGGCTACTGATGACAGGAGATTGGATCTTTCCGAGGTCTTCTATGTTGGACAGTCTGTTCGCAGCAACATAGTTGATGTTAGTACTGAGATGGGTAGAATTACACTGTCGTTGAAGCAATCACTGTGCTGTTCAACTGATGCATCTTTTATTCAAGAATACTTTCTTTTGGAAGAGAAGATTGCAAAGCTGCAAGTATTGGAGCCCGAAGGCCCTGGATTGAGATGGATTGACGAATTTGGTATTTGCAGTATTGTTGAAGGAAAAGTACATGAAATTAAGGATTATGGTGTTGTTATAAGCTTTGAAGAACATAACGATGTATTTGGCTTCATCTCACATTATCAATTGGGGGGAACCTTTGTGGAGAGCAATTCTGTTATCCAAGCTGCAGTTCTTGATGTTTCGAAGATTGAACGCCTTGTTGATCTATCTTTAAAGCCAGAGTTCATAAATAGAGCAAAAGAAGAGAGATCTAGTTCTAAAGCACATAAGAAGAAACGCAAAAGAGAAGCCCATAAAGATTTGGAATTGAATCAAATAGTAAATGCAATAGTCGAGATTGTGAAGGAAAATTATTTGGTACTTTCGCTTCCAGCTTATAATTGTACCATTGCGTATGCATCACTGAGTGATTACAACACTCAGAAATTACCTACTAAACAGTTTACCCATGGACAAAGTGTCTCTGCCACAGTAATGGCTCTTCCAACTCCTGCAACAGGTGGGAGATTGCTTCTGCTGCTCAAATCTGTAAGTGATGGTATGGAGACATCCAGTTCTAAGCGGGCAAAGAAGAGGTCCAGTTATGATGTTGGGTCTCTCGTTCAGGCGGAGATTACTGAAATAAAGCCTCTGGAAGTTAGAGTGAAATTTGGTTCTGGATCTCTTGGAAGAGTACATGTAACTGAGGCGACTGATGATAACTCTACTGAAAGTCCATTTAGTGACTACAGAATTGGGCAAACACTGACAGCGAGGATTGTTTCAAATGGTAGGAAGTCGGAAAATGTTAAAGGAAGTTATGGATGCGAATTATCTATCAAACCTTCATTGCTTAAAGGATCTGGTGAAATAGATGAACTGATTTCTGAAGAGTTCAACTATTCATATGGGCAACGTGTTTCTGGTTTCGTATACAAGACCGACTCTGAGTGGGCTTGGCTGGCTGTATCTCGTGATGTAAGGGCTCAGTTATATATTCTTGACTCTTCATGCGAGCCACCTGAACTTGAGGAGTTCCAGAAGCGGTTTTCTGTTGGCAAAGCTCTGTCAGGTTATGTAACCTGTGTGAACAAGGAGAAGAAGTTGCTACGTGTGGTCTTGCATAAACCAGCTGATGGTTTGGGGGATCTCAGAGAGAATGATTCCAATCAGGAGTTAATGTGCCATTTAGCTGAAGGTTGTGTTGTGGGTGGCAGGATTTCTAAAATTCTTCCTGGTGTTGGTGGATTGCTGGTCCAAATTGATCAGCACCATTATGGTAAGGTTCATTATACTGAGTTGACAGACTGGCTCCCCGACCCACTTGCTGGTTATCACATTGGACAGTTCGTGAAATGTAAAGTTCTTGAAATTAGTCGTGCTATTAAGGGCAGAATCCACGTTGACTTATCACTGCGTTTAACTCCACATACTTCACATGCCATGCACACTTCTACGCAGCATGTGTACATGATAACAGATTTTCATCCGAATATGGTTGTACAGGGTTATGTTAAAAACATCTCTTCGAAAGGATGTTTTATTATGCTTTCACGAAAGATAGATGCCAAGATTCTCCTTTCTAATTTGTCGGACAACTTCGTCAAAAATCCAGAAAATGAATTTCCTGTTGGAAAGCTTGTGTCTGGCAGGGTGCTATCGGTGGAGCCATTGTCTAAGCGGATTGAAGTTACCCTTCAGACTTCAAGTGCCATCAGGGCATCAAAGACGGGCACTAATCCCTTAAGTCATATCAATGTTGAAGATGTTGGGTTATGTCATGTTTCAGAGCTTTCCGATGAACGTATAGATGAGCCAGATAAAATGTTCAAAGCTGGGGAGAAAGTGACAGCAAAAGTTTTGAAGGTGGATAAAGAGAGAAATCGAATTTCTCTTGGGATGAAGAAATCATATTTCACTGACGAGGAAGCATTGCAGACACCTTCAAGACAAAACCATGGTTTTGCTCCGGGGATAAATGATTCTGTTGTATATGCTGAGCCAACAGTGGTACCACAGAACATCTCTGCTTGCATTGAGAACACGAATAATGTATCTGACAATGTTCTTCATCCTATACTAGCTGATGTTGAATCTAGGGCTCTTGTGCCGCCTCTTGATGTTCCACTTGATGACATTGAAAGCATGGACAATGATGGTAATGTTGGTCATATTGTGGAAAATGCTGCTACTAATGCAGATACCACAGAAGACAAAGGCAAAAAGAGTGCCAAAAAAAAAGCTAGGGAAGAGAGGGAAAGAGAAATAAGAGCTGCTGAGGAGAGGCTGCTGGAAAAAGACATCCCAAGGAATGCTGATGAGTTTGAGAAACTTATTAGGAGTTCTCCAAACAGCAGCTTTATATGGATAAAATACATGGCATTTATGCTCTCGTTAGCAGATATTGAGAAGGCACGATCCATTGCTGAAAGGGCTTTGAGAACAATAAATATCCGGGAAGAGTCTGAGAAGCTGAATATCTGGGTTGCTTATTTCAACTTGGAAAATGAGTATGGCAATCCTCCTGAGGAGGCTGTTATGAAAATCTTTCAAAGAGCCTTGCAGTATTGTGATCCCAAAAAGGTGCATCTTGCCCTTCTTGGAATGTATGAGAGAACCGAACAAGATAAGTTAGCTGATGAGCTTCTTGACAAAATGGCCAGAAAGTTTAAACAGTCATGCAAGGTCTGGCTGAGGAAAATCCAGTCTCTTTTGAAAAGAGAGAGCGATGGAGTTCAGTCTGTTGTAAACCGTGCTCTTCTGAGCCTTCCTCGACACAAGCATATAAAGTTTATTTCACAGACAGCAATCCTTGAATTCAAATGTGGAGTTGCAGATAGGGGAAGAGCCATGTTTGAGAATATGCTTAGGGAGTATCCCAAGAGGACGGATTTGTGGAGCATCTATCTTGATCAGGAGATCCGGCTCGGTGATGTGGATTTGATTCGTGCTTTATTTGAGAGGGCAATAAGTTTGAGCCTTCCCCTAAAGAAGATGAAGTCCATTGGTGACGAAGAGCGAATTGAGTCAGTGAAGAAGAAGGCGATGGATTATGTTGAGAATACCTTGCTTGATTGTTTAGTCGTTACGGCCACATCTTACCAAATAGGCGCTACTTGTCCGTCTCAACCCGATCTTGGCACTTGTAGGCAAGGTAGGGTGTGGCACTTCCCGATTCCACTTCTCAAAGCGTGA
Protein:  
MSPPSKKPESKPNLKNLERPSKKRPKSEGNGAVSSAQLPLQVEDDVPDFPRGGGGSFSREERNGARTVEDRDFESDQIVLKKRKKEKRVQNRIQSTEEDLGSLFGDGITGKLPRFANKITMKNISLGMKLWGVIAEMNEKDIVVGLPGGLRGLVRASDAFDPILGDGVKVDVENGFLSRIYHEGQLVSCTVLQIDDDKKEIAKRKIWLSLRLSLLHQNLSLDTIQEGMVLSAYVKSIEDHGFILHFGLSSFAGFMPKDNQSESRTNKVSMGQLSQGIVKRVDRTRKVVHLSSDPDMISKCVTKELKGISIDLLVPGMMVNARVQSTLENGVMFSFLTYFTGTVDLFNLDKTFPSSNWKNDYTKNMKFNARILFIDPSTRAVGLTLNRHLVSNKAASSLVKIGDIFDQSKVVRVDKGSGLLLEIPTLPTSTPTYVNATDVADKDVGKLEKSFKEGSLVRVRVHGYRHLEGLATGILKTSALEGMVFTHSDVKPGMVVKAKVIAVDSFGAIVQFASGVKALCPLRHMSEFEIAKPRKKFQNGAELVFRVLGCKSKRITVTHKKTLVKSKLQILSSYADAAAGLVTHGWITKIEKHGCFVRFYNGVQGLAPRSELGLGPGGDIGSMYHVEQVVKCRVVNCIPASHRITLSFNMTPSRASADESVKPGSLVSGVVERITPHALIVDINASSHIKGTISLEHLADHQGLAALLMSAMKPGYQFDELLVLDIEGNNVVLTAKYSLVNSVQQLPVDISQIRTHSVMHGYICNIIETGCFVRFIGRSTGFAPKSKATDDRRLDLSEVFYVGQSVRSNIVDVSTEMGRITLSLKQSLCCSTDASFIQEYFLLEEKIAKLQVLEPEGPGLRWIDEFGICSIVEGKVHEIKDYGVVISFEEHNDVFGFISHYQLGGTFVESNSVIQAAVLDVSKIERLVDLSLKPEFINRAKEERSSSKAHKKKRKREAHKDLELNQIVNAIVEIVKENYLVLSLPAYNCTIAYASLSDYNTQKLPTKQFTHGQSVSATVMALPTPATGGRLLLLLKSVSDGMETSSSKRAKKRSSYDVGSLVQAEITEIKPLEVRVKFGSGSLGRVHVTEATDDNSTESPFSDYRIGQTLTARIVSNGRKSENVKGSYGCELSIKPSLLKGSGEIDELISEEFNYSYGQRVSGFVYKTDSEWAWLAVSRDVRAQLYILDSSCEPPELEEFQKRFSVGKALSGYVTCVNKEKKLLRVVLHKPADGLGDLRENDSNQELMCHLAEGCVVGGRISKILPGVGGLLVQIDQHHYGKVHYTELTDWLPDPLAGYHIGQFVKCKVLEISRAIKGRIHVDLSLRLTPHTSHAMHTSTQHVYMITDFHPNMVVQGYVKNISSKGCFIMLSRKIDAKILLSNLSDNFVKNPENEFPVGKLVSGRVLSVEPLSKRIEVTLQTSSAIRASKTGTNPLSHINVEDVGLCHVSELSDERIDEPDKMFKAGEKVTAKVLKVDKERNRISLGMKKSYFTDEEALQTPSRQNHGFAPGINDSVVYAEPTVVPQNISACIENTNNVSDNVLHPILADVESRALVPPLDVPLDDIESMDNDGNVGHIVENAATNADTTEDKGKKSAKKKAREEREREIRAAEERLLEKDIPRNADEFEKLIRSSPNSSFIWIKYMAFMLSLADIEKARSIAERALRTINIREESEKLNIWVAYFNLENEYGNPPEEAVMKIFQRALQYCDPKKVHLALLGMYERTEQDKLADELLDKMARKFKQSCKVWLRKIQSLLKRESDGVQSVVNRALLSLPRHKHIKFISQTAILEFKCGVADRGRAMFENMLREYPKRTDLWSIYLDQEIRLGDVDLIRALFERAISLSLPLKKMKSIGDEERIESVKKKAMDYVENTLLDCLVVTATSYQIGATCPSQPDLGTCRQGRVWHFPIPLLKA